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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs147074070 chr2:109421334 TCTC/T 2.91E-12 505 37.75 25.78 2.3 KM Plot
KIRC rs147338965 chr16:23602483 G/GA 8.29E-9 507 37.6 34.87 1.62 KM Plot
KIRC rs147669619 chr2:109359940 A/G 3.05E-12 507 37.77 26.17 2.3 KM Plot
KIRC rs147844741 chr21:36737086 G/A 5.88E-5 499 37.73 36.95 10.73 KM Plot
KIRC rs1478518 chr2:109483667 A/G 1.28E-11 508 37.7 27.4 2.3 KM Plot
KIRC rs1478519 chr2:109492146 T/C 8.53E-12 506 37.7 26.43 2.3 KM Plot
KIRC rs148121874 chr2:109385226 C/G 3.16E-12 508 37.75 26.17 2.3 KM Plot
KIRC rs148441289 chr16:2958461 A/C 1.57E-5 501 37.03 38.42 9.37 KM Plot
KIRC rs148691246 chr2:67585780 T/G 2.23E-7 506 37.37 37.73 2.03 KM Plot
KIRC rs148863150 chr21:47960789 G/A 1.33E-5 505 37.47 37.43 6.87 KM Plot
KIRC rs148939080 chr10:33025590 AT/A 3.31E-6 506 37.37 37.63 7.33 KM Plot
KIRC rs149006384 chr3:124363835 G/A 5.21E-5 496 37.18 40.1 18.7 KM Plot
KIRC rs149237448 chr3:48219917 CAG/C 0.000118 497 38 35.92 23.1 KM Plot
KIRC rs149429613 chr16:2950448 G/C 1.48E-5 497 37.03 39.23 9.37 KM Plot
KIRC rs149431788 chr9:92166315 A/G 5.57E-5 502 37.03 48.2 10.62 KM Plot